MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,464
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,534
Total number of protein coding genes annotated/found:
2,464
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5004|JADGKH010000020.1
SEQF5004_02534
Genome Viewer
NA
AA
513/171
86744-87256
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02533
Genome Viewer
NA
AA
393/131
86234-86626
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02532
Genome Viewer
NA
AA
765/255
85320-86084
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02531
Genome Viewer
NA
AA
408/136
84618-85025
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02530
Genome Viewer
NA
AA
648/216
83978-84625
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02529
Genome Viewer
NA
AA
492/164
83259-83750
IS3 family transposase ISClsp1
SEQF5004|JADGKH010000020.1
SEQF5004_02528
Genome Viewer
NA
AA
243/81
82967-83209
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02527
Genome Viewer
NA
AA
153/51
82690-82842
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02526
Genome Viewer
NA
AA
102/34
82532-82633
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02524
Genome Viewer
NA
AA
465/155
81497-81961
SsrA-binding protein
SEQF5004|JADGKH010000020.1
SEQF5004_02523
Genome Viewer
NA
AA
2373/791
79103-81475
Ribonuclease R
SEQF5004|JADGKH010000020.1
SEQF5004_02522
Genome Viewer
NA
AA
741/247
78329-79069
Carboxylesterase
SEQF5004|JADGKH010000020.1
SEQF5004_02521
Genome Viewer
NA
AA
234/78
77980-78213
putative protein-export membrane protein SecG
SEQF5004|JADGKH010000020.1
SEQF5004_02520
Genome Viewer
NA
AA
459/153
77455-77913
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02519
Genome Viewer
NA
AA
1305/435
75812-77116
Enolase
SEQF5004|JADGKH010000020.1
SEQF5004_02518
Genome Viewer
NA
AA
1518/506
74165-75682
2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase
SEQF5004|JADGKH010000020.1
SEQF5004_02517
Genome Viewer
NA
AA
762/254
73401-74162
Triosephosphate isomerase
SEQF5004|JADGKH010000020.1
SEQF5004_02516
Genome Viewer
NA
AA
1191/397
72089-73279
Phosphoglycerate kinase
SEQF5004|JADGKH010000020.1
SEQF5004_02515
Genome Viewer
NA
AA
1011/337
70940-71950
Glyceraldehyde-3-phosphate dehydrogenase 1
SEQF5004|JADGKH010000020.1
SEQF5004_02514
Genome Viewer
NA
AA
1014/338
69874-70887
Central glycolytic genes regulator
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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